Developments
Millet project maintained by:
Tel: +44 (0) 1603 452 571, Fax: +44 (0) 1603 502 241
What is Millet?
The name "millet" has been given to various grasses with small
edible seeds which are generally borne on short (0.3 to 1.2 metres), slim
stalks. Pearl millet is the exception to this description since its stalks
are over twice as long (1.5 to 3 metres) and thicker. Although the millets
have several common morphological traits the term millet is not a strict
classification. Therefore the taxonomy of the millets span several tribes
(see table) although they are all members of the Gramineae family.
| Tribe |
Genus |
Example species |
| Paniceae |
Panicum, Setaria, Echinochloa, Pennisetum and Paspalum |
proso millet (Panicum miliaceum), foxtail millet (Setaria
italica), japanese barnyard millet (Echinochola crusgalli),
pearl millet (Pennisetum glaucum) and koda millet (Paspalum scrobiculatum) |
| Chlorideae |
Eleusine |
finger millet (Eleusine coracana) |
| Festuceae |
Eragrostis |
teff millet (Eragrostis tef) |
Taxonomy of millets
At JIC, genome research is carried out on pearl millet, foxtail millet
and finger millet.
Pearl millet has the seventh or eighth largest annual production in
the world giving it significant economic importance. It is used both as
food and for fodder. It is especially important in arid and semi-arid regions
of India since it is one of the only crops that can survive in such dry
conditions. Although generally well adapted to the food growing conditions
in these regions, major constraints to yields are susceptibility to downy
mildew infections and to abiotic stresses such as drought and high temperatures
at the time of seedling establishment. The species has large phenotypic
variation and several wild relatives that can intercross with it making
it ideal for genetic study.
Finger millet derives its name from the morphology of the seedhead.
It is an important cereal in Eastern and Southern Africa and India. The
crop is highly nutritious, with high levels of the essential amino acid
methionine. There is excellent scope for improvement through breeding for
resistance to biotic and abiotic stresses, improved grain quality and enhanced
yield.
Foxtail millet is native to temperate Eurasia and, today, is mainly
produced in China. The crop is realtively drought tolerant and well adapted
to arid and semi-arid growing conditions. Due to its small genome size,
comparable to that of rice, and its inherent high levels of variation,
it is rapidly developing as a model for genetic analyses.
Millet and UK CropNet
Millet Genes is an ACEDB millet database that has been developed as
a repository and unified communication tool for the results of the various
collaborations on pearl millet between ICRISAT,
The University of Wales, Bangor,
IGER and
The John Innes Centre. ICRISAT and the
University of Wales, Bangor are working together to locate genes that enhance
resistance to downy mildew. IGER is working with ICRISAT to find seedling
thermotolerance genes. Both projects link closely with research programmes at the
John Innes Centre that is using molecular markers to map the millet genomes.
The initial funding of Millet Genes came from
ODA
and is continued by the BBSRC as
part of UK CropNet. We will continue to update and add to the pearl millet
data in Millet Genes as well as adding finger millet and foxtail millet
data. By linking with the other cereals databases using comparative tools,
we hope to be able to link all grass genome data.
Developments
One of the requirements of the pearl millet collaborators was a tool
for quick analysis of the large amounts of segregation data produced for
the various crosses. The result of this is an ACEDB display that uses colour
coding to highlight recombinants in the segregation data:
A demo of the java applet version of this display is now available
here (see also the
UK CropNet software page).
The final version of this applet may be used standalone via
jade
or through a CGI interface. There are plans to develop further such tools
using java, perl and ACEDB servers. These may be suitable for analysis of
single databases or they may be orientated towards comparative analysis of
species. Experimental jade interfaces are available for the following databases:
|
| ~ Links |
BBSRC grants
List current Millet-related BBSRC grants |
FTP site
Download our databasesfrom the CropNet FTP site |
ACEDB
ACEDB site at Sanger Centre |
NASC
Nottingham Arabidopsis Stock Centre |
SCRI
Scottish Crop Research Institute |
John Innes Centre
Research centre for Plant Science. Also home to BrassicaDB, MilletGenes
and ComapDB |
IGER
Institute of Grassland and Environmental Research |
Garnet
Genomic Arabidopsis Resource Network |
Contact us
Please email us if you have any questions.
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