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Project coordinators
What is Millet?
Millet and UK CropNet
Developments




Millet project maintained by:

Matt Couchman (developer)
Katrien Devos (Principal Investigator)
Mike Gale (Principal Investigator)

John Innes Centre,
Norwich Research Park,
Colney, Norwich,
NR4 7UH, UK

Tel: +44 (0) 1603 452 571, Fax: +44 (0) 1603 502 241



What is Millet?
The name "millet" has been given to various grasses with small edible seeds which are generally borne on short (0.3 to 1.2 metres), slim stalks. Pearl millet is the exception to this description since its stalks are over twice as long (1.5 to 3 metres) and thicker. Although the millets have several common morphological traits the term millet is not a strict classification. Therefore the taxonomy of the millets span several tribes (see table) although they are all members of the Gramineae family.

Tribe Genus Example species
Paniceae Panicum, Setaria, Echinochloa, Pennisetum and Paspalum proso millet (Panicum miliaceum), foxtail millet (Setaria italica), japanese barnyard millet (Echinochola crusgalli), pearl millet (Pennisetum glaucum) and koda millet (Paspalum scrobiculatum)
Chlorideae Eleusine finger millet (Eleusine coracana)
Festuceae Eragrostis teff millet (Eragrostis tef)
Taxonomy of millets

At JIC, genome research is carried out on pearl millet, foxtail millet and finger millet.

Pearl millet Pearl millet has the seventh or eighth largest annual production in the world giving it significant economic importance. It is used both as food and for fodder. It is especially important in arid and semi-arid regions of India since it is one of the only crops that can survive in such dry conditions. Although generally well adapted to the food growing conditions in these regions, major constraints to yields are susceptibility to downy mildew infections and to abiotic stresses such as drought and high temperatures at the time of seedling establishment. The species has large phenotypic variation and several wild relatives that can intercross with it making it ideal for genetic study.

Finger millet derives its name from the morphology of the seedhead. It is an important cereal in Eastern and Southern Africa and India. The crop is highly nutritious, with high levels of the essential amino acid methionine. There is excellent scope for improvement through breeding for resistance to biotic and abiotic stresses, improved grain quality and enhanced yield.

Foxtail millet is native to temperate Eurasia and, today, is mainly produced in China. The crop is realtively drought tolerant and well adapted to arid and semi-arid growing conditions. Due to its small genome size, comparable to that of rice, and its inherent high levels of variation, it is rapidly developing as a model for genetic analyses.


Millet and UK CropNet
Millet Genes is an ACEDB millet database that has been developed as a repository and unified communication tool for the results of the various collaborations on pearl millet between
ICRISAT, The University of Wales, Bangor, IGER and The John Innes Centre. ICRISAT and the University of Wales, Bangor are working together to locate genes that enhance resistance to downy mildew. IGER is working with ICRISAT to find seedling thermotolerance genes. Both projects link closely with research programmes at the John Innes Centre that is using molecular markers to map the millet genomes.

The initial funding of Millet Genes came from ODA and is continued by the BBSRC as part of UK CropNet. We will continue to update and add to the pearl millet data in Millet Genes as well as adding finger millet and foxtail millet data. By linking with the other cereals databases using comparative tools, we hope to be able to link all grass genome data.


Developments
One of the requirements of the pearl millet collaborators was a tool for quick analysis of the large amounts of segregation data produced for the various crosses. The result of this is an ACEDB display that uses colour coding to highlight recombinants in the segregation data:

A demo of the java applet version of this display is now available here (see also the UK CropNet software page). The final version of this applet may be used standalone via jade or through a CGI interface. There are plans to develop further such tools using java, perl and ACEDB servers. These may be suitable for analysis of single databases or they may be orientated towards comparative analysis of species. Experimental jade interfaces are available for the following databases:




 ~ Links

BBSRC grants
List current Millet-related BBSRC grants

FTP site
Download our databasesfrom the CropNet FTP site

ACEDB
ACEDB site at Sanger Centre

NASC
Nottingham Arabidopsis Stock Centre

SCRI
Scottish Crop Research Institute

John Innes Centre
Research centre for Plant Science. Also home to BrassicaDB, MilletGenes and ComapDB

IGER
Institute of Grassland and Environmental Research

Garnet
Genomic Arabidopsis Resource Network


Contact us
Please email us if you have any questions.



Page last modified: Friday, 19-Oct-2001 16:48:33 BST
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